Lifespan changes: From wild type to daf-16;raga-1;skn-1
20
NGM
18.64
-18.71%
Triple mutant daf-16(mgDf47);raga-1(RNAi);skn-1(zu67) has a lifespan of 18.64 days, while single mutant raga-1(RNAi) has a lifespan of 28.91 days, double mutant daf-16(mgDf47);skn-1(zu67) has a lifespan of 18.65 days and wild type has a lifespan of 22.93 days.
Contains dependence
										Robida-Stubbs S et al., 2012, TOR signaling and rapamycin influence longevity by regulating SKN-1/Nrf and DAF-16/FoxO. Cell Metab. 15(5):713-24  22560223
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 22560223
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20
NGM
18.78
-14.98%
Triple mutant daf-16(mgDf47);raga-1(RNAi);skn-1(zu67) has a lifespan of 18.78 days, while single mutant raga-1(RNAi) has a lifespan of 24.02 days, double mutant daf-16(mgDf47);skn-1(zu67) has a lifespan of 18.27 days and wild type has a lifespan of 22.09 days.
Contains dependence
										Robida-Stubbs S et al., 2012, TOR signaling and rapamycin influence longevity by regulating SKN-1/Nrf and DAF-16/FoxO. Cell Metab. 15(5):713-24  22560223
										Click here to select all mutants from this PubMed ID in the graph
 22560223
										Click here to select all mutants from this PubMed ID in the graph
									
20
NGM
18.55
-19.87%
Triple mutant daf-16(mgDf47);raga-1(RNAi);skn-1(zu67) has a lifespan of 18.55 days, while single mutant raga-1(RNAi) has a lifespan of 32.9 days, double mutant daf-16(mgDf47);skn-1(zu67) has a lifespan of 19.05 days and wild type has a lifespan of 23.15 days.
Contains dependence
										Robida-Stubbs S et al., 2012, TOR signaling and rapamycin influence longevity by regulating SKN-1/Nrf and DAF-16/FoxO. Cell Metab. 15(5):713-24  22560223
										Click here to select all mutants from this PubMed ID in the graph
 22560223
										Click here to select all mutants from this PubMed ID in the graph
									
Forkhead box protein O;hypothetical protein
Locus: CELE_R13H8.1
Wormbase description: daf-16 encodes the sole C. elegans forkhead box O (FOXO) homologue; DAF-16 functions as a transcription factor that acts in the insulin/IGF-1-mediated signaling (IIS) pathway that regulates dauer formation, longevity, fat metabolism, stress response, and innate immunity; DAF-16 regulates these various processes through isoform-specific expression, isoform-specific regulation by different AKT kinases, and differential regulation of target genes; DAF-16 can interact with the CBP-1 transcription cofactor in vitro, and interacts genetically with other genes in the insulin signaling and with daf-12, which encodes a nuclear hormone receptor; DAF-16 is activated in response to DNA damage during development and co-regulated by EGL-27, alleviates DNA-damage-induced developmental arrest by inducing DAF-16-associated element (DAE)-regulated genes; DAF-16 is broadly expressed but displays isoform-specific tissue enrichment; DAF-16 localizes to both the cytoplasm and the nucleus, with the ratio between the two an important regulator of function.
RAs-related GTP-binding protein A
Locus: CELE_T24F1.1
Wormbase description: raga-1 encodes the C. elegans ortholog of the ras-related GTPase RagA; in C. elegans RAGA-1 functions as a modifier of behavioral aging and adult lifespan (particularly under high food concentration); raga-1 mutations also affect body size and reproduction; genetic analyses suggest that raga-1 functions in the let-363/Tor pathway to regulate behavioral aging and lifespan and also interacts with the daf-2/daf-16 insulin signaling pathway and skn-1; raga-1 reporter fusions are widely expressed in larvae, with more restricted expression (gut, head and tail neurons, somatic gonad, hypodermis) seen in adults.
Protein skinhead-1;SKiNhead
Locus: CELE_T19E7.2
Wormbase description: skn-1 encodes a bZip transcription factor orthologous to the mammalian Nrf (Nuclear factor-erythroid-related factor) transcription factors; during early embryogenesis, maternally provided SKN-1 is required for specification of the EMS blastomere, a mesendodermal precursor that gives rise to pharyngeal, muscle, and intestinal cells; later, during postembryonic development, SKN-1 functions in the p38 MAPK pathway to regulate the oxidative stress response and in parallel to DAF-16/FOXO in the DAF-2-mediated insulin/IGF-1-like signaling pathway to regulate adult lifespan; in vitro assays indicate that SKN-1 can be directly phosphorylated by the AKT-1, AKT-2, and SGK-1 kinases that lie downstream of DAF-2 in the insulin signaling pathway and in vivo experiments suggest that this phosphorylation is essential for regulation of SKN-1 nuclear accumulation and hence, transcriptional regulator activity; in the early embryo, SKN-1 is detected at highest levels in nuclei of the P1 blastomere and its descendants through the 8-cell stage of embryogenesis; later in embryogenesis, SKN-1 is observed in all hypodermal and intestinal nuclei, with reporter constructs indicating that intestinal expression begins as early as the 50-100-cell stage; in larvae and young adults, SKN-1::GFP reporters are expressed in the intestine and ASI neurons, with expression in intestinal nuclei enhanced under conditions of stress or reduced DAF-2 signaling.
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SynergyAge database hosts high-quality, manually curated information about the synergistic and antagonistic lifespan effects of genetic interventions in model organisms, also allowing users to explore the longevity relationships between genes in a visual way.
If you would like to cite this database please use:
Bunu, G., Toren, D., Ion, C. et al. SynergyAge, a curated database for synergistic and antagonistic interactions of longevity-associated genes. Sci Data 7, 366 (2020). https://doi.org/10.1038/s41597-020-00710-z
 
						
						Group webpage: www.aging-research.group