Lifespan changes: From wild type to daf-16;trpa-1
25
NGM
11.31
Upon daf-16 RNAi treatment, trpa-1 and pkc-2 mutant worms showed a lifespan similar to that of wild-type worms at all three different temperatures.
Double mutant daf-16(RNAi);trpa-1(ok999) has a lifespan of 11.31 days, while single mutant trpa-1(ok999) has a lifespan of 11.31 days and single mutant daf-16(RNAi) has a lifespan of 11.31 days.
										Xiao R et al., 2013, A genetic program promotes C. elegans longevity at cold temperatures via a thermosensitive TRP channel. Cell. 152(4):806-17  23415228
										Click here to select all mutants from this PubMed ID in the graph
 23415228
										Click here to select all mutants from this PubMed ID in the graph
									
20
NGM
13.82
Upon daf-16 RNAi treatment, trpa-1 and pkc-2 mutant worms showed a lifespan similar to that of wild-type worms at all three different temperatures.
Double mutant daf-16(RNAi);trpa-1(ok999) has a lifespan of 13.82 days, while single mutant trpa-1(ok999) has a lifespan of 13.82 days and single mutant daf-16(RNAi) has a lifespan of 13.82 days.
										Xiao R et al., 2013, A genetic program promotes C. elegans longevity at cold temperatures via a thermosensitive TRP channel. Cell. 152(4):806-17  23415228
										Click here to select all mutants from this PubMed ID in the graph
 23415228
										Click here to select all mutants from this PubMed ID in the graph
									
15
NGM
18.0
Upon daf-16 RNAi treatment, trpa-1 and pkc-2 mutant worms showed a lifespan similar to that of wild-type worms at all three different temperatures.
Double mutant daf-16(RNAi);trpa-1(ok999) has a lifespan of 18.0 days, while single mutant trpa-1(ok999) has a lifespan of 18.0 days and single mutant daf-16(RNAi) has a lifespan of 18.0 days.
										Xiao R et al., 2013, A genetic program promotes C. elegans longevity at cold temperatures via a thermosensitive TRP channel. Cell. 152(4):806-17  23415228
										Click here to select all mutants from this PubMed ID in the graph
 23415228
										Click here to select all mutants from this PubMed ID in the graph
									
20
NGM
15.8
-15.51%
Loss of daf-16 abolished the ability of trpa-1 transgenes to extend lifespan.
Double mutant daf-16(mgDf47);trpa-1(xuEx601) has a lifespan of 15.8 days, while single mutant daf-16(mgDf47) has a lifespan of 16.0 days, single mutant trpa-1(xuEx601) has a lifespan of 23.8 days and wild type has a lifespan of 18.7 days.
Opposite lifespan effects of single mutants
										Xiao R et al., 2013, A genetic program promotes C. elegans longevity at cold temperatures via a thermosensitive TRP channel. Cell. 152(4):806-17  23415228
										Click here to select all mutants from this PubMed ID in the graph
 23415228
										Click here to select all mutants from this PubMed ID in the graph
									
20
NGM
20.2
-11.40%
Loss of daf-16 abolished the ability of trpa-1 transgenes to extend lifespan.
Double mutant daf-16(mgDf47);trpa-1(xuEx601) has a lifespan of 20.2 days, while single mutant daf-16(mgDf47) has a lifespan of 19.4 days, single mutant trpa-1(xuEx601) has a lifespan of 25.0 days and wild type has a lifespan of 22.8 days.
Opposite lifespan effects of single mutants
										Xiao R et al., 2013, A genetic program promotes C. elegans longevity at cold temperatures via a thermosensitive TRP channel. Cell. 152(4):806-17  23415228
										Click here to select all mutants from this PubMed ID in the graph
 23415228
										Click here to select all mutants from this PubMed ID in the graph
									
20
NGM
16.0
-14.44%
Loss of daf-16 abolished the ability of trpa-1 transgenes to extend lifespan.
Double mutant daf-16(mgDf47);trpa-1(xuEx606) has a lifespan of 16.0 days, while single mutant daf-16(mgDf47) has a lifespan of 16.0 days, single mutant trpa-1(xuEx606) has a lifespan of 21.1 days and wild type has a lifespan of 18.7 days.
Opposite lifespan effects of single mutants
										Xiao R et al., 2013, A genetic program promotes C. elegans longevity at cold temperatures via a thermosensitive TRP channel. Cell. 152(4):806-17  23415228
										Click here to select all mutants from this PubMed ID in the graph
 23415228
										Click here to select all mutants from this PubMed ID in the graph
									
Forkhead box protein O;hypothetical protein
Locus: CELE_R13H8.1
Wormbase description: daf-16 encodes the sole C. elegans forkhead box O (FOXO) homologue; DAF-16 functions as a transcription factor that acts in the insulin/IGF-1-mediated signaling (IIS) pathway that regulates dauer formation, longevity, fat metabolism, stress response, and innate immunity; DAF-16 regulates these various processes through isoform-specific expression, isoform-specific regulation by different AKT kinases, and differential regulation of target genes; DAF-16 can interact with the CBP-1 transcription cofactor in vitro, and interacts genetically with other genes in the insulin signaling and with daf-12, which encodes a nuclear hormone receptor; DAF-16 is activated in response to DNA damage during development and co-regulated by EGL-27, alleviates DNA-damage-induced developmental arrest by inducing DAF-16-associated element (DAE)-regulated genes; DAF-16 is broadly expressed but displays isoform-specific tissue enrichment; DAF-16 localizes to both the cytoplasm and the nucleus, with the ratio between the two an important regulator of function.
TRPA cation channel homolog;Transient receptor potential cation channel subfamily A member 1 homolog
Locus: CELE_C29E6.2
Wormbase description: trpa-1 encodes a transient receptor potential (TRP) ion channel orthologous to the vertebrate and Drosophila TRPA1 channels; in C. elegans, trpa-1 activity is required for specific mechanosensory behaviors such as nose-touch avoidance and touch-mediated foraging; when expressed in mammalian cells, TRPA-1 exhibits channel activity in response to mechanical stimulation; TRPA-1::GFP reporters are expressed in a number of different cell types including sensory neurons, muscle, and epithelial cells.
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SynergyAge database hosts high-quality, manually curated information about the synergistic and antagonistic lifespan effects of genetic interventions in model organisms, also allowing users to explore the longevity relationships between genes in a visual way.
If you would like to cite this database please use:
Bunu, G., Toren, D., Ion, C. et al. SynergyAge, a curated database for synergistic and antagonistic interactions of longevity-associated genes. Sci Data 7, 366 (2020). https://doi.org/10.1038/s41597-020-00710-z
 
						
						Group webpage: www.aging-research.group