pha-4;wwp-1

Lifespan changes: From wild type to pha-4;wwp-1

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Genetic mutants with pha-4, wwp-1 alterations

    Names of genes are ordered alphabetically. For the order of interventions, please see the specific paper.
  • Temperature °C

    20

  • Diet

    HT115

  • Lifespan (days)

    17.5

  • Lifespan change (compared to wild type)

    -6.42%

  • Phenotype

    RNAi reduction of pha-4 suppressed the increased longevity of worms overexpressing wwp-1

  • Lifespan comparisons

    Double mutant pha-4(RNAi);wwp-1(OE) has a lifespan of 17.5 days, while single mutant pha-4(RNAi) has a lifespan of 16.7 days, single mutant wwp-1(OE) has a lifespan of 23.1 days and wild type has a lifespan of 18.7 days.

  • Type of interaction
    See methods

    Opposite lifespan effects of single mutants

  • Citation
    View abstract

    Carrano AC et al., 2009, A conserved ubiquitination pathway determines longevity in response to diet restriction. Nature. 460(7253):396-9 PubMed 19553937 Click here to select all mutants from this PubMed ID in the graph

  • Temperature °C

    20

  • Diet

    HT115

  • Lifespan (days)

    16.4

  • Lifespan change (compared to wild type)

    -12.30%

  • Phenotype

    RNAi reduction of pha-4 suppressed the increased longevity of worms overexpressing wwp-1

  • Lifespan comparisons

    Double mutant pha-4(RNAi);wwp-1(OE) has a lifespan of 16.4 days, while single mutant pha-4(RNAi) has a lifespan of 15.6 days, single mutant wwp-1(OE) has a lifespan of 21.1 days and wild type has a lifespan of 18.7 days.

  • Type of interaction
    See methods

    Opposite lifespan effects of single mutants

  • Citation
    View abstract

    Carrano AC et al., 2009, A conserved ubiquitination pathway determines longevity in response to diet restriction. Nature. 460(7253):396-9 PubMed 19553937 Click here to select all mutants from this PubMed ID in the graph

  • Temperature °C

    20

  • Diet

    HT115

  • Lifespan (days)

    17.1

  • Lifespan change (compared to wild type)

    -8.56%

  • Phenotype

    RNAi reduction of pha-4 suppressed the increased longevity of worms overexpressing wwp-1

  • Lifespan comparisons

    Double mutant pha-4(RNAi);wwp-1(OE) has a lifespan of 17.1 days, while single mutant pha-4(RNAi) has a lifespan of 16.3 days, single mutant wwp-1(OE) has a lifespan of 21.5 days and wild type has a lifespan of 18.7 days.

  • Type of interaction
    See methods

    Opposite lifespan effects of single mutants

  • Citation
    View abstract

    Carrano AC et al., 2009, A conserved ubiquitination pathway determines longevity in response to diet restriction. Nature. 460(7253):396-9 PubMed 19553937 Click here to select all mutants from this PubMed ID in the graph

Search genes: pha-4 wwp-1
  • Entrez ID
  • Symbol
  • GenAge
  • Wormbase ID

Defective pharyngeal development protein 4


Locus: CELE_F38A6.1


Wormbase description: pha-4 encodes a FoxA transcription factor; during embryonic development, PHA-4 functions as an organ identity gene whose activity is necessary and sufficient for development of the pharynx/foregut; in addition, PHA-4 plays a key role in regulation of diet-restriction-induced longevity in adult animals; PHA-4 expression begins early in embryogenesis and is seen in pharyngeal and intestinal cells (foregut and midgut); PHA-4 is also expressed later in the developing somatic gonad.


  • Entrez ID
  • Symbol
  • GenAge
  • Wormbase ID

E3 ubiquitin-protein ligase;WW domain Protein (E3 ubiquitin ligase)


Locus: CELE_Y65B4BR.4


Wormbase description: wwp-1 encodes, by alternative splicing, two isoforms of a putative E3 ubiquitin ligase orthologous to budding yeast Rsp5, Drosophila SU(DX), and human WWP1 (OMIM:602307) and WWP2 (OMIM:602308); WWP-1 is required for proteolysis of the intracellular LIN-12 domain in primary ventral precursor cells, and for protection of germ cells against ionizing radiation or camptothecin, as well as for normal acetylcholine neurotransmission, axonal guidance and fasciculation, patterning of the ventral nerve cord, locomotion, fat content, and late embryonic morphogenesis; in UV-irradiated nondauer larvae, WWP-1 stimulates the proteolysis of AMA-1; although WWP-1's is normally blocked from fully activating AMA-1 proteolysis by XPA-1/RAD-3, it also cooperates with XPA-1/RAD-3 to protect worms from UV-irradiation; WWP-1 is expressed in many neurons (cholinergic and GABAergic motor neurons, head, tail, body, and nerve cords), in larval and adult pharynx, intestine, renal gland cells and rectal epithelium, and in adult vulval muscle, body wall muscle, and coelomocytes; WWP-1 contains an N-terminal C2 domain, four central WW repeats and a C-terminal HECT ubiquitin ligase domain; WWP-1 binds UBC-18 in yeast two-hybrid assays, but is not required for UBC-18's activity in pharyngeal development.


Orthologs of pha-4;wwp-1 in SynergyAge
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Orthologs of pha-4 in SynergyAge
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Orthologs of wwp-1 in SynergyAge
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About

SynergyAge database hosts high-quality, manually curated information about the synergistic and antagonistic lifespan effects of genetic interventions in model organisms, also allowing users to explore the longevity relationships between genes in a visual way.

Read more about SynergyAge database

How to cite us

If you would like to cite this database please use:

Bunu, G., Toren, D., Ion, C. et al. SynergyAge, a curated database for synergistic and antagonistic interactions of longevity-associated genes. Sci Data 7, 366 (2020). https://doi.org/10.1038/s41597-020-00710-z

Contact
Robi Tacutu, Ph.D.
Head: Systems Biology of Aging Group, Bioinformatics & Structural Biochemistry Department
Institute of Biochemistry, Ground floor
Splaiul Independentei 296, Bucharest, Romania
Email:

Group webpage: www.aging-research.group